Main bioinformatics services:
Bioinformatician Matti Kankainen
Single Cell Omics bioinformatics
SC OMICS bioinformatics provides single cell data analysis advice, training and guidelines nationally and internationally.
Bioinformatician Bishwa Ghimire
Differential expression analysis of single cell expression data
The research infrastructure is supported by University of Helsinki (HiLIFE) and Biocenter Finland.
User access policy:
Open access service where customer prioritization is done as first-come, first-serve basis.
General single cell data analysis guidelines you can find here. Contact us to get further information.
In addition, we can assist in:
Identification of genetic variants
Identification on somatic mutations in tumors
Identification on putative disease causing variants from exomes/genomes
Identification and quantification of mutations in common tumor genes
Providing: data management for whole genome association, targeted, or linkage studies; tracking genotypic and phenotypic data in databases, with capabilities for managing phenotypes, family-structures, genotypes, samples, plates, SNP/STR, maps, output to analysis packages, and more. We manage all types of samples and associated data in customizable multi-level inventories that can be developed into laboratory workflows.